Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 AC123731.1-201ENSMUST00000227417 1403 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm16166-201ENSMUST00000118291 787 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm15197-201ENSMUST00000120526 478 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm20392-201ENSMUST00000173047 701 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Mir8115-201ENSMUST00000184992 119 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm43097-201ENSMUST00000196867 151 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm43119-201ENSMUST00000196957 2122 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42710-201ENSMUST00000200608 985 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 1700017G19Rik-201ENSMUST00000035860 2437 ntTSL 2 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Tmem19-204ENSMUST00000217887 3084 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccdc28bQ8CEG5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Dtnbos-201ENSMUST00000173847 1662 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm7583-201ENSMUST00000182941 1005 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37390-201ENSMUST00000192452 872 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms