Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm15602-201ENSMUST00000116162 465 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm37232-201ENSMUST00000194887 367 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm8083-201ENSMUST00000203976 475 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trub1Q8C0D0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm11235-201ENSMUST00000117763 333 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm15032-201ENSMUST00000118547 411 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm14213-201ENSMUST00000119778 768 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm12035-201ENSMUST00000121890 623 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm22344-201ENSMUST00000122642 278 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm5526-201ENSMUST00000153604 423 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Mir6366-201ENSMUST00000184472 82 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms