Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm12397-201ENSMUST00000117674 615 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm13204-201ENSMUST00000120110 821 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm11544-201ENSMUST00000120215 382 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm13740-201ENSMUST00000120590 310 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm9574-201ENSMUST00000173127 845 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm7928-201ENSMUST00000181249 701 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm43316-201ENSMUST00000197252 1295 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm44155-201ENSMUST00000203923 412 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm24933-201ENSMUST00000103762 110 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm23252-201ENSMUST00000103776 110 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm26313-201ENSMUST00000157770 308 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm26443-201ENSMUST00000179610 110 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm7445-201ENSMUST00000192115 340 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm42780-201ENSMUST00000197083 734 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm18555-201ENSMUST00000197935 584 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms