Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm38004-201ENSMUST00000192972 357 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm8828-201ENSMUST00000196786 1290 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 AC156274.1-201ENSMUST00000219193 634 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 CT025689.5-201ENSMUST00000224316 986 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 AC154433.1-201ENSMUST00000224401 1183 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 AC121357.1-201ENSMUST00000227365 608 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Lmo4P61969 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm15599-201ENSMUST00000122283 1345 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm10344-201ENSMUST00000193498 1419 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Lmo4P61969 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 AA474408-201ENSMUST00000098110 3339 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Lmo4P61969 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Lmo4P61969 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Lmo4P61969 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Lmo4P61969 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm12420-201ENSMUST00000119869 1048 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm14829-201ENSMUST00000121499 1138 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm14370-201ENSMUST00000122460 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm13898-201ENSMUST00000141865 610 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm15273-201ENSMUST00000142302 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm7023-201ENSMUST00000147295 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm14357-201ENSMUST00000178352 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm14361-201ENSMUST00000178547 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm14348-201ENSMUST00000179183 868 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm17797-201ENSMUST00000182175 997 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Mir6396-201ENSMUST00000183603 111 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm37921-201ENSMUST00000194333 695 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm21631-201ENSMUST00000195041 754 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm45090-201ENSMUST00000208775 1148 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Lmo4P61969 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Lmo4P61969 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gm9790-201ENSMUST00000054148 288 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Vgll3-202ENSMUST00000227997 1383 ntBASIC8.42□□□□□ -1.06
Lmo4P61969 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC8.42□□□□□ -1.06
Lmo4P61969 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.42□□□□□ -1.06
Lmo4P61969 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Lmo4P61969 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms