Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Cdx2P43241 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm5189-201ENSMUST00000221796 261 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 AC114585.2-201ENSMUST00000227693 486 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm26205-201ENSMUST00000082907 134 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Gm7790-201ENSMUST00000118716 1310 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cdx2P43241 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cdx2P43241 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.94□□□□□ -0.82
Cdx2P43241 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
Cdx2P43241 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm4880-201ENSMUST00000207645 1696 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm15602-201ENSMUST00000116162 465 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Gm12011-201ENSMUST00000119734 618 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm17147-201ENSMUST00000164176 432 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Mir6934-201ENSMUST00000183965 62 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Gm8022-201ENSMUST00000191763 904 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm18646-201ENSMUST00000212240 1063 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm5292-201ENSMUST00000073317 580 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Cdx2P43241 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cdx2P43241 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Cdx2P43241 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.94□□□□□ -0.82
Cdx2P43241 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cdx2P43241 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cdx2P43241 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm7001-201ENSMUST00000219384 1465 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Cdx2P43241 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 n-R5s154-201ENSMUST00000122513 108 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC9.93□□□□□ -0.82
Cdx2P43241 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Mir6360-201ENSMUST00000184278 126 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm36980-201ENSMUST00000195643 622 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms