Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cd9P40240 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Gm11475-201ENSMUST00000118482 476 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.3□□□□□ -0.76
Cd9P40240 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Cd9P40240 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Cd9P40240 Gm27440-201ENSMUST00000184785 107 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.3□□□□□ -0.76
Cd9P40240 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Gm7904-201ENSMUST00000217049 465 ntBASIC10.3□□□□□ -0.76
Cd9P40240 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.3□□□□□ -0.76
Cd9P40240 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Cd9P40240 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cd9P40240 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Gm31763-202ENSMUST00000218205 1724 ntBASIC10.3□□□□□ -0.76
Cd9P40240 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cd9P40240 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd9P40240 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Cd9P40240 Gm13039-201ENSMUST00000118638 794 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Gm14113-201ENSMUST00000121399 976 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Gm6686-201ENSMUST00000178455 258 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Gm8601-201ENSMUST00000182096 909 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.29□□□□□ -0.76
Cd9P40240 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.29□□□□□ -0.76
Cd9P40240 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cd9P40240 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Gm37593-201ENSMUST00000191669 3254 ntBASIC10.29□□□□□ -0.76
Cd9P40240 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd9P40240 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd9P40240 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd9P40240 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd9P40240 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cd9P40240 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd9P40240 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.28□□□□□ -0.76
Cd9P40240 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.28□□□□□ -0.76
Cd9P40240 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC10.28□□□□□ -0.76
Cd9P40240 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cd9P40240 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms