Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Gm23432-201ENSMUST00000157181 131 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Gm44460-201ENSMUST00000196179 129 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.98□□□□□ -0.49
Vcam1P29533 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 n-R5s25-201ENSMUST00000082923 119 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm13498-201ENSMUST00000119159 2166 ntBASIC11.97□□□□□ -0.49
Vcam1P29533 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.97□□□□□ -0.49
Vcam1P29533 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm23521-201ENSMUST00000177845 110 ntBASIC11.97□□□□□ -0.49
Vcam1P29533 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm8256-202ENSMUST00000227964 828 ntBASIC11.97□□□□□ -0.49
Vcam1P29533 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.97□□□□□ -0.49
Vcam1P29533 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
Vcam1P29533 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vcam1P29533 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vcam1P29533 Gm42879-201ENSMUST00000198656 2214 ntBASIC11.96□□□□□ -0.49
Vcam1P29533 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.96□□□□□ -0.49
Vcam1P29533 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.96□□□□□ -0.49
Vcam1P29533 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.96□□□□□ -0.49
Vcam1P29533 Gm11800-201ENSMUST00000120050 579 ntBASIC11.96□□□□□ -0.49
Vcam1P29533 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.96□□□□□ -0.49
Vcam1P29533 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Gm3945-201ENSMUST00000196637 683 ntBASIC11.96□□□□□ -0.49
Vcam1P29533 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Vcam1P29533 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vcam1P29533 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vcam1P29533 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms