Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm26982-201ENSMUST00000182250 1151 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Olfr860-203ENSMUST00000212353 1030 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm8637-201ENSMUST00000212919 1085 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC8.57□□□□□ -1.04
Hoxd3P09027 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.57□□□□□ -1.04
Hoxd3P09027 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Hoxd3P09027 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Hoxd3P09027 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Hoxd3P09027 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Hoxd3P09027 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm11560-201ENSMUST00000117567 948 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm12990-201ENSMUST00000120372 468 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm13445-201ENSMUST00000121664 307 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm24248-201ENSMUST00000157321 322 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm25332-201ENSMUST00000158038 105 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm7609-203ENSMUST00000160058 1142 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm16165-201ENSMUST00000160140 795 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm15795-201ENSMUST00000160969 553 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm10012-202ENSMUST00000170379 372 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hoxd3P09027 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm31123-201ENSMUST00000192094 666 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm18984-201ENSMUST00000193998 1124 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm44181-201ENSMUST00000203106 483 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm44814-201ENSMUST00000207018 434 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC8.56□□□□□ -1.04
Hoxd3P09027 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC8.56□□□□□ -1.04
Hoxd3P09027 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC154585.1-201ENSMUST00000218917 997 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 Gm9102-201ENSMUST00000219250 465 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC166830.1-201ENSMUST00000224201 533 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC158392.3-201ENSMUST00000224271 1284 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC154572.1-201ENSMUST00000226098 1204 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC115304.2-201ENSMUST00000226399 332 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC132833.3-201ENSMUST00000227472 866 ntBASIC8.56□□□□□ -1.04
Hoxd3P09027 AC154589.2-201ENSMUST00000228847 251 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms