Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm43339-201ENSMUST00000200032 1606 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm12165-201ENSMUST00000117047 342 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm13284-201ENSMUST00000121020 547 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm22144-201ENSMUST00000157402 102 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm23699-201ENSMUST00000158835 135 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm19353-201ENSMUST00000184561 445 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm6677-201ENSMUST00000195100 441 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm37905-201ENSMUST00000195310 341 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm43222-201ENSMUST00000199013 603 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 AC173345.3-201ENSMUST00000221245 1093 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.69□□□□□ -0.86
Trim13Q9CYB0 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms