Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Otud1Q9CUB6 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm11996-201ENSMUST00000117538 915 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm13039-201ENSMUST00000118638 794 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm14957-201ENSMUST00000121069 817 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm22344-201ENSMUST00000122642 278 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm16288-201ENSMUST00000137940 367 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm17214-201ENSMUST00000164501 541 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm27440-201ENSMUST00000184785 107 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm28917-201ENSMUST00000187294 237 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm43564-201ENSMUST00000196185 211 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm44332-201ENSMUST00000203712 433 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm45500-201ENSMUST00000211676 803 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 AA474408-201ENSMUST00000098110 3339 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.18□□□□□ -0.78
Otud1Q9CUB6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Otud1Q9CUB6 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm45832-201ENSMUST00000212762 1443 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm42995-201ENSMUST00000197047 1330 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm14746-201ENSMUST00000120309 741 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm12950-201ENSMUST00000121683 417 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.17□□□□□ -0.78
Otud1Q9CUB6 Gm25843-201ENSMUST00000122582 314 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms