Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm14113-201ENSMUST00000121399 976 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm7539-201ENSMUST00000189789 630 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm42430-201ENSMUST00000197209 616 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm43506-201ENSMUST00000200675 753 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm5905-201ENSMUST00000211731 580 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trub1Q8C0D0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm37484-201ENSMUST00000195378 2523 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm24328-201ENSMUST00000175104 67 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm26272-201ENSMUST00000179241 132 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Mir6360-201ENSMUST00000184278 126 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm27440-201ENSMUST00000184785 107 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm42751-201ENSMUST00000198065 559 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm6390-201ENSMUST00000215034 589 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm19121-201ENSMUST00000215720 1022 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.74□□□□□ -0.69
Trub1Q8C0D0 Gm6353-201ENSMUST00000223234 1051 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms