Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm15636-201ENSMUST00000119205 668 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm11824-201ENSMUST00000120191 846 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm7805-201ENSMUST00000154348 448 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm8022-201ENSMUST00000191763 904 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm9409-201ENSMUST00000197017 316 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm18862-201ENSMUST00000204643 933 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Spata33-207ENSMUST00000212760 4074 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm15032-201ENSMUST00000118547 411 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm17799-201ENSMUST00000183270 667 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm44540-201ENSMUST00000205640 354 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm8730-201ENSMUST00000076373 954 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.62□□□□□ -0.71
Sh3rf2Q8BZT2 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms