Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm13688-201ENSMUST00000121557 608 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm6612-201ENSMUST00000170777 395 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm6291-201ENSMUST00000179994 309 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm27833-201ENSMUST00000184285 124 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm37604-201ENSMUST00000191749 1272 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm37197-201ENSMUST00000195607 401 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm6649-201ENSMUST00000199743 1165 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm6794-201ENSMUST00000203829 457 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm45276-201ENSMUST00000209549 1086 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm19540-201ENSMUST00000221843 810 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pcdh19Q80TF3 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Spata33-207ENSMUST00000212760 4074 ntBASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh19Q80TF3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms