Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Snora68-201ENSMUST00000104375 131 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm15264-201ENSMUST00000118050 502 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Mir6953-201ENSMUST00000184745 68 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm37751-201ENSMUST00000192440 1198 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm7904-201ENSMUST00000217049 465 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.22□□□□□ -0.45
Rc3h1Q4VGL6 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm23255-201ENSMUST00000102244 110 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm12489-201ENSMUST00000119364 148 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm15061-201ENSMUST00000121076 1046 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm11942-201ENSMUST00000180255 345 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm37944-201ENSMUST00000194233 414 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm8643-201ENSMUST00000195228 625 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm6518-201ENSMUST00000208450 342 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 CT009711.2-202ENSMUST00000224538 973 ntBASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h1Q4VGL6 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rc3h1Q4VGL6 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rc3h1Q4VGL6 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.2□□□□□ -0.46
Rc3h1Q4VGL6 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms