Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 AU022133-201ENSMUST00000200601 873 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Gm19091-201ENSMUST00000208120 978 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Gm7172-201ENSMUST00000218047 1152 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Gm6781-201ENSMUST00000038304 1242 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC8.74□□□□□ -1.01
Npas1P97459 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Zcchc12-201ENSMUST00000048067 2089 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.74□□□□□ -1.01
Npas1P97459 AC133598.5-201ENSMUST00000224937 1517 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Gm38383-201ENSMUST00000194131 2660 ntBASIC8.74□□□□□ -1.01
Npas1P97459 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC8.74□□□□□ -1.01
Npas1P97459 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Npas1P97459 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm18198-201ENSMUST00000204986 1551 ntBASIC8.73□□□□□ -1.01
Npas1P97459 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 AC121860.1-201ENSMUST00000227908 2787 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Npas1P97459 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm45132-201ENSMUST00000207234 2542 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC8.73□□□□□ -1.01
Npas1P97459 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm11836-201ENSMUST00000121022 441 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm28450-201ENSMUST00000187349 638 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Gm44323-201ENSMUST00000198689 129 ntBASIC8.73□□□□□ -1.01
Npas1P97459 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC8.73□□□□□ -1.01
Npas1P97459 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC8.73□□□□□ -1.01
Npas1P97459 CT025694.1-201ENSMUST00000226188 934 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Gm5468-202ENSMUST00000227851 682 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Piwil4-201ENSMUST00000076946 2637 ntTSL 2 BASIC8.73□□□□□ -1.01
Npas1P97459 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC8.73□□□□□ -1.01
Npas1P97459 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC8.73□□□□□ -1.01
Npas1P97459 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Npas1P97459 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Npas1P97459 Gm4900-201ENSMUST00000222046 1628 ntBASIC8.72□□□□□ -1.01
Npas1P97459 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Npas1P97459 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Npas1P97459 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms