Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Best3-201ENSMUST00000020378 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Lsm3P62311 Pdk4-201ENSMUST00000019721 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lsm3P62311 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lsm3P62311 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Nbr1-206ENSMUST00000107213 4339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm14028-201ENSMUST00000117434 479 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm14231-201ENSMUST00000120090 592 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm27501-201ENSMUST00000183599 107 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm44967-201ENSMUST00000207047 631 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gm9619-201ENSMUST00000211587 762 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.38□□□□□ -0.91
Lsm3P62311 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lsm3P62311 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lsm3P62311 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm43288-201ENSMUST00000197594 2628 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Tle3-208ENSMUST00000160882 3523 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Rint1-201ENSMUST00000030852 3298 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Zmiz2-202ENSMUST00000102914 3806 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lsm3P62311 Gm37052-201ENSMUST00000194929 1831 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.38□□□□□ -0.91
Lsm3P62311 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Wfs1-202ENSMUST00000166339 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm17816-201ENSMUST00000219991 2603 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 AC104200.1-201ENSMUST00000224527 1746 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Tmem19-204ENSMUST00000217887 3084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Lsm3P62311 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm16219-201ENSMUST00000120096 274 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm26361-201ENSMUST00000158868 186 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm38317-201ENSMUST00000195564 343 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Gm44323-201ENSMUST00000198689 129 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Gm44262-201ENSMUST00000204969 372 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.37□□□□□ -0.91
Lsm3P62311 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms