Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.67□□□□□ -0.38
LtbrP50284 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.67□□□□□ -0.38
LtbrP50284 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LtbrP50284 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.67□□□□□ -0.38
LtbrP50284 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.67□□□□□ -0.38
LtbrP50284 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.67□□□□□ -0.38
LtbrP50284 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.67□□□□□ -0.38
LtbrP50284 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LtbrP50284 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LtbrP50284 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LtbrP50284 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gm14997-201ENSMUST00000119232 636 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gm15403-201ENSMUST00000119343 1227 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.66□□□□□ -0.38
LtbrP50284 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-7-201ENSMUST00000180364 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir6934-201ENSMUST00000183965 62 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm3116-201ENSMUST00000189440 1116 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm21631-201ENSMUST00000195041 754 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-6-201ENSMUST00000196127 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-12-201ENSMUST00000197274 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-5-201ENSMUST00000197439 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-10-201ENSMUST00000197745 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-11-201ENSMUST00000197952 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-4-201ENSMUST00000198665 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-9-201ENSMUST00000200087 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Mir669a-8-201ENSMUST00000200268 87 ntBASIC12.66□□□□□ -0.38
LtbrP50284 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm18391-201ENSMUST00000217189 658 ntBASIC12.66□□□□□ -0.38
LtbrP50284 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.66□□□□□ -0.38
LtbrP50284 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.66□□□□□ -0.38
LtbrP50284 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.66□□□□□ -0.38
LtbrP50284 AC131100.2-201ENSMUST00000227701 998 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC12.66□□□□□ -0.38
LtbrP50284 Gm25514-201ENSMUST00000083860 135 ntBASIC12.66□□□□□ -0.38
LtbrP50284 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LtbrP50284 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LtbrP50284 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.65□□□□□ -0.38
LtbrP50284 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
LtbrP50284 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.65□□□□□ -0.38
LtbrP50284 Gm8177-201ENSMUST00000181591 1336 ntBASIC12.65□□□□□ -0.38
LtbrP50284 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LtbrP50284 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LtbrP50284 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
LtbrP50284 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms