Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.96□□□□□ -0.81
Cdx2P43241 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm15702-201ENSMUST00000119680 444 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm23081-201ENSMUST00000157845 297 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm25694-201ENSMUST00000175448 282 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cdx2P43241 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm9273-201ENSMUST00000200606 715 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Gm7319-201ENSMUST00000210047 778 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Cdx2P43241 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cdx2P43241 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Gm11427-201ENSMUST00000117952 1696 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Gm9864-201ENSMUST00000090043 1656 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.96□□□□□ -0.82
Cdx2P43241 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx2P43241 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Cdx2P43241 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Cdx2P43241 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.95□□□□□ -0.82
Cdx2P43241 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Cdx2P43241 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm23129-201ENSMUST00000104259 132 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm24368-201ENSMUST00000175388 106 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC9.95□□□□□ -0.82
Cdx2P43241 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx2P43241 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC9.95□□□□□ -0.82
Cdx2P43241 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC9.95□□□□□ -0.82
Cdx2P43241 Gm7924-201ENSMUST00000203975 785 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms