Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cd28P31041 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC9.13□□□□□ -0.95
Cd28P31041 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.13□□□□□ -0.95
Cd28P31041 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Cd28P31041 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.13□□□□□ -0.95
Cd28P31041 Gm8737-201ENSMUST00000122208 642 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.13□□□□□ -0.95
Cd28P31041 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Mir8115-201ENSMUST00000184992 119 ntBASIC9.13□□□□□ -0.95
Cd28P31041 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.13□□□□□ -0.95
Cd28P31041 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.13□□□□□ -0.95
Cd28P31041 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Gm10263-201ENSMUST00000085163 300 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cd28P31041 Gm9978-201ENSMUST00000069431 3273 ntBASIC9.13□□□□□ -0.95
Cd28P31041 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cd28P31041 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm22582-201ENSMUST00000102283 94 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cd28P31041 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm11801-201ENSMUST00000117807 746 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm14231-201ENSMUST00000120090 592 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm4726-201ENSMUST00000135604 736 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm6019-201ENSMUST00000148369 736 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.12□□□□□ -0.95
Cd28P31041 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm29155-201ENSMUST00000185910 269 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.12□□□□□ -0.95
Cd28P31041 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.12□□□□□ -0.95
Cd28P31041 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cd28P31041 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.12□□□□□ -0.95
Cd28P31041 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms