Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
P20040 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm11560-201ENSMUST00000117567 948 ntBASIC9.29□□□□□ -0.92
P20040 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.29□□□□□ -0.92
P20040 Gm13019-201ENSMUST00000120000 276 ntBASIC9.29□□□□□ -0.92
P20040 Gm13445-201ENSMUST00000121664 307 ntBASIC9.29□□□□□ -0.92
P20040 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.29□□□□□ -0.92
P20040 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.29□□□□□ -0.92
P20040 Gm24248-201ENSMUST00000157321 322 ntBASIC9.29□□□□□ -0.92
P20040 Gm25830-201ENSMUST00000158923 132 ntBASIC9.29□□□□□ -0.92
P20040 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm5529-201ENSMUST00000165691 891 ntBASIC9.29□□□□□ -0.92
P20040 Gm17192-201ENSMUST00000169031 511 ntBASIC9.29□□□□□ -0.92
P20040 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
P20040 Gm22877-201ENSMUST00000175451 105 ntBASIC9.29□□□□□ -0.92
P20040 Gm7255-201ENSMUST00000187371 908 ntBASIC9.29□□□□□ -0.92
P20040 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
P20040 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.29□□□□□ -0.92
P20040 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.29□□□□□ -0.92
P20040 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.29□□□□□ -0.92
P20040 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
P20040 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
P20040 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
P20040 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.29□□□□□ -0.92
P20040 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.29□□□□□ -0.92
P20040 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.28□□□□□ -0.92
P20040 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.28□□□□□ -0.92
P20040 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.28□□□□□ -0.92
P20040 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.28□□□□□ -0.92
P20040 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.28□□□□□ -0.92
P20040 Gm19927-201ENSMUST00000185792 781 ntBASIC9.28□□□□□ -0.92
P20040 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Gm44216-201ENSMUST00000203942 157 ntBASIC9.28□□□□□ -0.92
P20040 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.28□□□□□ -0.92
P20040 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm18042-201ENSMUST00000219887 790 ntBASIC9.28□□□□□ -0.92
P20040 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.28□□□□□ -0.92
P20040 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.28□□□□□ -0.92
P20040 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.28□□□□□ -0.92
P20040 Capsl-202ENSMUST00000226688 739 ntBASIC9.28□□□□□ -0.92
P20040 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
P20040 Gm7589-201ENSMUST00000085631 534 ntBASIC9.28□□□□□ -0.92
P20040 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.28□□□□□ -0.92
P20040 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
P20040 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
P20040 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.28□□□□□ -0.92
P20040 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.28□□□□□ -0.92
P20040 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
P20040 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P20040 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.28□□□□□ -0.92
P20040 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms