Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm28324-201ENSMUST00000187913 264 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm38210-201ENSMUST00000191944 809 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm3793-201ENSMUST00000204973 672 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm18059-201ENSMUST00000208073 580 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm7600-201ENSMUST00000209657 785 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm45745-201ENSMUST00000211447 1180 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Igh-VJ558P01758 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm23612-201ENSMUST00000103823 110 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm11235-201ENSMUST00000117763 333 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm15032-201ENSMUST00000118547 411 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm1826-201ENSMUST00000118646 1162 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm14219-201ENSMUST00000120414 288 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm15196-201ENSMUST00000121406 482 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm11736-201ENSMUST00000121468 505 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm11354-201ENSMUST00000121974 422 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm25288-201ENSMUST00000122800 265 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm24328-201ENSMUST00000175104 67 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm23576-201ENSMUST00000179918 110 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm7539-201ENSMUST00000189789 630 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm43506-201ENSMUST00000200675 753 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 AC154585.1-201ENSMUST00000218917 997 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms