Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm8618-201ENSMUST00000097570 432 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm5501-201ENSMUST00000165917 832 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm22994-201ENSMUST00000175422 82 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm29487-201ENSMUST00000190146 256 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm5190-201ENSMUST00000192434 357 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm40332-201ENSMUST00000199847 938 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm18122-201ENSMUST00000211390 904 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rrp8Q9DB85 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rrp8Q9DB85 Gm15626-201ENSMUST00000117478 868 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms