Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm13857-201ENSMUST00000139645 173 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm19566-201ENSMUST00000199576 610 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm25201-201ENSMUST00000083093 170 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm13549-201ENSMUST00000118339 796 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm13039-201ENSMUST00000118638 794 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm14006-201ENSMUST00000122132 981 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm18201-201ENSMUST00000174735 875 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm24328-201ENSMUST00000175104 67 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Mir8111-201ENSMUST00000184463 137 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm37597-201ENSMUST00000191853 382 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm42780-201ENSMUST00000197083 734 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm42803-201ENSMUST00000201051 451 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.93□□□□□ -0.66
Chmp2aQ9DB34 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23400-201ENSMUST00000174994 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm26463-201ENSMUST00000175065 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm24332-201ENSMUST00000175102 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25959-201ENSMUST00000175112 102 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms