Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s104-201ENSMUST00000179107 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s113-201ENSMUST00000179143 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s133-201ENSMUST00000179275 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s117-201ENSMUST00000179431 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm25212-201ENSMUST00000179432 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s138-201ENSMUST00000179476 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s122-201ENSMUST00000179500 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s143-201ENSMUST00000179542 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s107-201ENSMUST00000179704 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm26391-201ENSMUST00000179843 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s110-201ENSMUST00000179995 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s128-201ENSMUST00000180096 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s124-201ENSMUST00000180334 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm29155-201ENSMUST00000185910 269 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm37390-201ENSMUST00000192452 872 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm34379-201ENSMUST00000195036 290 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 AC161172.1-201ENSMUST00000227801 486 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm24089-201ENSMUST00000093696 109 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm14993-201ENSMUST00000121180 164 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm19566-201ENSMUST00000199576 610 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm44640-201ENSMUST00000206894 247 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm6390-201ENSMUST00000215034 589 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Atf7-201ENSMUST00000096143 390 ntBASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clrn1Q8K445 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms