Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm18443-201ENSMUST00000185358 556 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm28179-201ENSMUST00000188365 613 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6069-201ENSMUST00000196501 463 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm19798-201ENSMUST00000201502 457 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5738-201ENSMUST00000206016 779 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6426-201ENSMUST00000209048 854 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.65□□□□□ -0.71
Sh3rf2Q8BZT2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Mir1896-201ENSMUST00000122641 81 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm37597-201ENSMUST00000191853 382 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm37390-201ENSMUST00000192452 872 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm2345-201ENSMUST00000193451 589 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Sh3rf2Q8BZT2 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh3rf2Q8BZT2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms