Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Hsd17b6-202ENSMUST00000219183 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Mipol1-205ENSMUST00000145003 1424 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm25608-201ENSMUST00000104021 132 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm7910-201ENSMUST00000117896 835 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Mir5114-201ENSMUST00000175574 61 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm25082-201ENSMUST00000177296 255 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Asb5-201ENSMUST00000033918 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm4908-201ENSMUST00000121923 1005 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm5398-201ENSMUST00000121933 984 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm22649-201ENSMUST00000175134 298 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm7255-201ENSMUST00000187371 908 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm34727-201ENSMUST00000195175 529 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm43693-201ENSMUST00000196072 1249 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Spata33-207ENSMUST00000212760 4074 ntBASIC9.63□□□□□ -0.87
Spg11Q3UHA3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Spg11Q3UHA3 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Apex2-202ENSMUST00000112719 969 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm29961-202ENSMUST00000215431 637 ntTSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm4120-201ENSMUST00000220456 578 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms