Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm12716-201ENSMUST00000120606 1354 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
H3f3aP84244 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm6783-201ENSMUST00000120916 1437 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Gm11354-201ENSMUST00000121974 422 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm13857-201ENSMUST00000139645 173 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm5526-201ENSMUST00000153604 423 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm7539-201ENSMUST00000189789 630 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
H3f3aP84244 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
H3f3aP84244 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
H3f3aP84244 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
H3f3aP84244 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.35□□□□□ -0.91
H3f3aP84244 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3aP84244 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
H3f3aP84244 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.34□□□□□ -0.91
H3f3aP84244 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm13549-201ENSMUST00000118339 796 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm22344-201ENSMUST00000122642 278 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm15620-201ENSMUST00000122949 270 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.34□□□□□ -0.91
H3f3aP84244 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm25569-201ENSMUST00000157175 131 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm26943-201ENSMUST00000182295 957 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm27953-201ENSMUST00000185171 143 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm37141-201ENSMUST00000191938 422 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm19566-201ENSMUST00000199576 610 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm44647-201ENSMUST00000207402 428 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms