Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ybx1P62960 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm11540-201ENSMUST00000117457 780 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm12254-201ENSMUST00000134617 471 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm17107-201ENSMUST00000170983 553 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm28746-201ENSMUST00000187453 380 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm21631-201ENSMUST00000195041 754 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm19566-201ENSMUST00000199576 610 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.78□□□□□ -0.68
Ybx1P62960 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.78□□□□□ -0.68
Ybx1P62960 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ybx1P62960 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ybx1P62960 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ybx1P62960 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Ybx1P62960 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ybx1P62960 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.77□□□□□ -0.68
Ybx1P62960 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Gm16480-201ENSMUST00000120439 832 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.77□□□□□ -0.69
Ybx1P62960 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.77□□□□□ -0.69
Ybx1P62960 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm28179-201ENSMUST00000188365 613 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm19798-201ENSMUST00000201502 457 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Gm44155-201ENSMUST00000203923 412 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm6727-201ENSMUST00000204102 1518 ntBASIC10.77□□□□□ -0.69
Ybx1P62960 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ybx1P62960 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ybx1P62960 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms