Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Mir598-201ENSMUST00000102094 79 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm8482-201ENSMUST00000117972 471 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm13841-201ENSMUST00000118829 483 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm11449-201ENSMUST00000119175 476 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm8210-201ENSMUST00000178557 483 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm15454-201ENSMUST00000179718 483 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm17797-201ENSMUST00000182175 997 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Mir6396-201ENSMUST00000183603 111 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Mir7088-201ENSMUST00000184227 86 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm3889-201ENSMUST00000212467 612 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm6344-201ENSMUST00000075962 483 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Mir341-201ENSMUST00000093593 96 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gm6727-201ENSMUST00000204102 1518 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm14633-201ENSMUST00000121152 470 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm23432-201ENSMUST00000157181 131 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm26532-201ENSMUST00000180630 690 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm28391-201ENSMUST00000185202 379 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm29528-201ENSMUST00000186699 379 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm29526-201ENSMUST00000187217 379 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.32□□□□□ -0.76
Rrp8Q9DB85 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms