Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm23045-201ENSMUST00000175041 96 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm21092-201ENSMUST00000178995 955 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm2260-201ENSMUST00000184965 657 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm45331-201ENSMUST00000209868 554 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 AC138284.4-201ENSMUST00000216704 2882 ntBASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm14028-201ENSMUST00000117434 479 ntBASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm8737-201ENSMUST00000122208 642 ntBASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm28450-201ENSMUST00000187349 638 ntBASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 AC157476.2-201ENSMUST00000217574 3200 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc28bQ8CEG5 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms