Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6755-201ENSMUST00000100598 864 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6740-201ENSMUST00000100617 864 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6517-201ENSMUST00000121056 511 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5976-201ENSMUST00000180794 996 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm30055-201ENSMUST00000203175 803 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm44388-201ENSMUST00000204350 258 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6727-201ENSMUST00000204102 1518 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 A1cf-204ENSMUST00000224564 1432 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm14176-201ENSMUST00000121302 477 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm20091-201ENSMUST00000179683 189 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5189-201ENSMUST00000221796 261 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sh3rf2Q8BZT2 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm13426-201ENSMUST00000117887 795 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm14997-201ENSMUST00000119232 636 ntBASIC10.65□□□□□ -0.7
Sh3rf2Q8BZT2 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms