Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm18749-201ENSMUST00000222410 692 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 AC127583.1-201ENSMUST00000224351 540 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Spata33-207ENSMUST00000212760 4074 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm24066-201ENSMUST00000104515 131 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm13197-201ENSMUST00000117204 225 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm26356-201ENSMUST00000158217 283 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm3687-201ENSMUST00000161710 460 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm17797-201ENSMUST00000182175 997 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Mir6396-201ENSMUST00000183603 111 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Gm9790-201ENSMUST00000054148 288 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp40Q8BWR4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp40Q8BWR4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gm14829-201ENSMUST00000121499 1138 ntBASIC14.33□□□□□ -0.12
Usp40Q8BWR4 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 AC137950.2-202ENSMUST00000227150 1635 ntBASIC14.33□□□□□ -0.12
Usp40Q8BWR4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms