Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm8019-201ENSMUST00000119317 587 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm12943-201ENSMUST00000119616 210 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm14231-201ENSMUST00000120090 592 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm15258-201ENSMUST00000153801 741 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Mir6923-201ENSMUST00000184592 72 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm38038-201ENSMUST00000193803 259 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm37232-201ENSMUST00000194887 367 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm7904-201ENSMUST00000217049 465 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.57□□□□□ -0.4
Vps54Q5SPW0 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps54Q5SPW0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Snora68-201ENSMUST00000104375 131 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm24470-201ENSMUST00000104486 132 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm15285-201ENSMUST00000119271 473 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm7593-201ENSMUST00000187246 644 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm37197-201ENSMUST00000195607 401 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm42689-201ENSMUST00000202403 404 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm6426-201ENSMUST00000209048 854 ntBASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps54Q5SPW0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms