Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx49Q4FZF3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm26532-201ENSMUST00000180630 690 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm5801-201ENSMUST00000182247 780 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm16477-201ENSMUST00000085365 801 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm17415-201ENSMUST00000096427 789 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx49Q4FZF3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm11235-201ENSMUST00000117763 333 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm15132-201ENSMUST00000118581 652 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm5501-201ENSMUST00000165917 832 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm17797-201ENSMUST00000182175 997 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm7255-201ENSMUST00000187371 908 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm6008-201ENSMUST00000206542 874 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm15599-201ENSMUST00000122283 1345 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx49Q4FZF3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx49Q4FZF3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms