Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Smarcc1P97496 AC151971.6-201ENSMUST00000216193 866 ntBASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcc1P97496 AC124772.3-201ENSMUST00000222535 575 ntBASIC13.18□□□□□ -0.3
Smarcc1P97496 AC192333.3-201ENSMUST00000224041 463 ntBASIC13.18□□□□□ -0.3
Smarcc1P97496 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC13.18□□□□□ -0.3
Smarcc1P97496 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Smarcc1P97496 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm38309-201ENSMUST00000192063 1518 ntBASIC13.18□□□□□ -0.3
Smarcc1P97496 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm24471-201ENSMUST00000104485 131 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm15032-201ENSMUST00000118547 411 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm12489-201ENSMUST00000119364 148 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 AA623943-201ENSMUST00000121794 354 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm8163-201ENSMUST00000122020 1060 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Mir8104-201ENSMUST00000185165 101 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm28746-201ENSMUST00000187453 380 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm2021-201ENSMUST00000190623 464 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm42908-201ENSMUST00000197508 870 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 AC100406.1-201ENSMUST00000217305 480 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm32914-201ENSMUST00000203815 2228 ntBASIC13.17□□□□□ -0.3
Smarcc1P97496 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Smarcc1P97496 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcc1P97496 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm7001-201ENSMUST00000219384 1465 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm21142-201ENSMUST00000179999 2604 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm22582-201ENSMUST00000102283 94 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm22669-201ENSMUST00000158723 318 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC13.16□□□□□ -0.3
Smarcc1P97496 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm44716-201ENSMUST00000209007 710 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms