Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
H3f3aP84244 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
H3f3aP84244 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm11824-201ENSMUST00000120191 846 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm14113-201ENSMUST00000121399 976 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm16397-201ENSMUST00000122201 494 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3aP84244 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.37□□□□□ -0.91
H3f3aP84244 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3aP84244 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm5274-201ENSMUST00000182641 1003 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm18123-201ENSMUST00000210874 822 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm18122-201ENSMUST00000211390 904 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.37□□□□□ -0.91
H3f3aP84244 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3aP84244 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
H3f3aP84244 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3aP84244 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm5472-201ENSMUST00000178604 1678 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm8216-201ENSMUST00000117232 601 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm12783-201ENSMUST00000121425 397 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm17070-201ENSMUST00000170463 784 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm26989-201ENSMUST00000182608 749 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm27440-201ENSMUST00000184785 107 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm28671-201ENSMUST00000187036 692 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.36□□□□□ -0.91
H3f3aP84244 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.36□□□□□ -0.91
H3f3aP84244 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3aP84244 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3aP84244 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms