Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbrP50284 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LtbrP50284 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.71□□□□□ -0.38
LtbrP50284 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LtbrP50284 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
LtbrP50284 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.71□□□□□ -0.38
LtbrP50284 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
LtbrP50284 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LtbrP50284 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.7□□□□□ -0.38
LtbrP50284 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Phf7-206ENSMUST00000228437 1373 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.7□□□□□ -0.38
LtbrP50284 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LtbrP50284 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC12.7□□□□□ -0.38
LtbrP50284 Gm16288-201ENSMUST00000137940 367 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.7□□□□□ -0.38
LtbrP50284 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Gm8707-201ENSMUST00000183325 980 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm42783-201ENSMUST00000197075 795 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm3527-201ENSMUST00000198905 460 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm9353-201ENSMUST00000200472 604 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm5291-201ENSMUST00000201965 899 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LtbrP50284 Gm3635-201ENSMUST00000212314 354 ntBASIC12.7□□□□□ -0.38
LtbrP50284 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 AC159293.2-201ENSMUST00000222289 424 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LtbrP50284 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
LtbrP50284 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Gm5292-201ENSMUST00000073317 580 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Gm10238-201ENSMUST00000089689 408 ntBASIC12.7□□□□□ -0.38
LtbrP50284 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LtbrP50284 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LtbrP50284 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.69□□□□□ -0.38
LtbrP50284 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC12.69□□□□□ -0.38
LtbrP50284 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LtbrP50284 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LtbrP50284 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.69□□□□□ -0.38
LtbrP50284 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LtbrP50284 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
LtbrP50284 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Gm12463-201ENSMUST00000118271 849 ntBASIC12.69□□□□□ -0.38
LtbrP50284 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.69□□□□□ -0.38
LtbrP50284 Gm15617-201ENSMUST00000118973 771 ntBASIC12.69□□□□□ -0.38
LtbrP50284 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.69□□□□□ -0.38
LtbrP50284 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LtbrP50284 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms