Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vcam1P29533 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.04□□□□□ -0.48
Vcam1P29533 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm31763-202ENSMUST00000218205 1724 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.04□□□□□ -0.48
Vcam1P29533 Gm29808-201ENSMUST00000194419 468 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Gm37020-201ENSMUST00000195303 992 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Gm4866-201ENSMUST00000197408 589 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Gm30652-201ENSMUST00000199103 430 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Gm34248-201ENSMUST00000200027 474 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC12.04□□□□□ -0.48
Vcam1P29533 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vcam1P29533 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Vcam1P29533 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.04□□□□□ -0.48
Vcam1P29533 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vcam1P29533 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Vcam1P29533 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vcam1P29533 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vcam1P29533 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Vcam1P29533 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm20953-201ENSMUST00000216399 2614 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.03□□□□□ -0.48
Vcam1P29533 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Spata33-207ENSMUST00000212760 4074 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm25723-201ENSMUST00000104530 126 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm4775-201ENSMUST00000169588 402 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm37921-201ENSMUST00000194333 695 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC12.03□□□□□ -0.48
Vcam1P29533 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vcam1P29533 AC156016.4-201ENSMUST00000227470 647 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vcam1P29533 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.03□□□□□ -0.48
Vcam1P29533 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vcam1P29533 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm44907-201ENSMUST00000207423 1633 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vcam1P29533 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC12.03□□□□□ -0.48
Vcam1P29533 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vcam1P29533 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Vcam1P29533 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vcam1P29533 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vcam1P29533 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vcam1P29533 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vcam1P29533 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vcam1P29533 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vcam1P29533 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms