Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm11235-201ENSMUST00000117763 333 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm21631-201ENSMUST00000195041 754 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm26440-201ENSMUST00000082591 129 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm25561-201ENSMUST00000104607 125 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm22388-201ENSMUST00000158194 248 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm29157-201ENSMUST00000188753 612 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm18862-201ENSMUST00000204643 933 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 AC174647.1-201ENSMUST00000227419 1271 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rrp8Q9DB85 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rrp8Q9DB85 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms