Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm38312-201ENSMUST00000195426 1746 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm12463-201ENSMUST00000118271 849 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm5501-201ENSMUST00000165917 832 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm18182-201ENSMUST00000191380 1251 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm7047-201ENSMUST00000196224 1063 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm10254-201ENSMUST00000052888 867 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm45496-201ENSMUST00000209918 2917 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm45110-201ENSMUST00000205704 1402 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm12047-201ENSMUST00000117561 944 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm13002-201ENSMUST00000119286 682 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm22876-201ENSMUST00000175450 298 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm28391-201ENSMUST00000185202 379 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm29528-201ENSMUST00000186699 379 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm29526-201ENSMUST00000187217 379 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm29487-201ENSMUST00000190146 256 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm3945-201ENSMUST00000196637 683 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm18391-201ENSMUST00000217189 658 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 AC172027.1-201ENSMUST00000217659 337 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Gm5194-201ENSMUST00000221457 742 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms