Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm8194-201ENSMUST00000159783 859 ntBASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 CT009713.2-201ENSMUST00000225532 1149 ntBASIC9.92□□□□□ -0.82
Clrn1Q8K445 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.92□□□□□ -0.82
Clrn1Q8K445 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clrn1Q8K445 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm12628-201ENSMUST00000122193 382 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm16441-201ENSMUST00000138176 924 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm6038-201ENSMUST00000154310 948 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm9574-201ENSMUST00000173127 845 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm24312-201ENSMUST00000178677 119 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm5801-201ENSMUST00000182247 780 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm44304-201ENSMUST00000200509 145 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.91□□□□□ -0.82
Clrn1Q8K445 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms