Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm6500-201ENSMUST00000119412 451 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm13857-201ENSMUST00000139645 173 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm24328-201ENSMUST00000175104 67 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm29155-201ENSMUST00000185910 269 ntBASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Trim9Q8C7M3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Gm29157-201ENSMUST00000188753 612 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Gm45363-201ENSMUST00000210196 1294 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 AC153498.1-201ENSMUST00000219775 2722 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms