Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm8216-201ENSMUST00000117232 601 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm11411-201ENSMUST00000117951 719 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm12489-201ENSMUST00000119364 148 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm9166-201ENSMUST00000120293 561 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm24294-201ENSMUST00000158295 277 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm8525-201ENSMUST00000189674 861 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm33707-201ENSMUST00000195135 569 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3rf2Q8BZT2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.67□□□□□ -0.7
Sh3rf2Q8BZT2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms