Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm5510-201ENSMUST00000117826 486 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm20493-201ENSMUST00000173706 213 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm43778-201ENSMUST00000199438 199 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm12028-201ENSMUST00000118065 436 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Mir432-201ENSMUST00000157230 75 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gm6564-201ENSMUST00000075377 619 ntBASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps54Q5SPW0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps54Q5SPW0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Vps54Q5SPW0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps54Q5SPW0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vps54Q5SPW0 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm7572-201ENSMUST00000182616 766 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm44420-201ENSMUST00000203669 490 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps54Q5SPW0 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms