Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm6298-201ENSMUST00000122262 981 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm26356-201ENSMUST00000158217 283 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Psme1-201ENSMUST00000089619 711 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm45088-201ENSMUST00000207066 1408 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm27500-201ENSMUST00000184331 336 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Mir7029-201ENSMUST00000184777 61 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Mir6922-201ENSMUST00000185099 66 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm43628-201ENSMUST00000197871 1187 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 1810059H22Rik-202ENSMUST00000203662 546 ntTSL 3 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Olfr1264-201ENSMUST00000099758 927 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 AC151903.1-201ENSMUST00000226677 1423 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm14830-201ENSMUST00000121899 700 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm16077-201ENSMUST00000121915 655 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 4933431E20Rik-205ENSMUST00000137970 795 ntTSL 3 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Plscr5-201ENSMUST00000179751 1191 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Etv3l-201ENSMUST00000193196 325 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm2694-209ENSMUST00000210935 1125 ntTSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gm42974-201ENSMUST00000199556 2654 ntBASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Spg11Q3UHA3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm12188-201ENSMUST00000117387 310 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm13361-201ENSMUST00000119977 1431 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms