Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC13.2□□□□□ -0.3
Smarcc1P97496 n-R5s154-201ENSMUST00000122513 108 ntBASIC13.2□□□□□ -0.3
Smarcc1P97496 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Gm44155-201ENSMUST00000203923 412 ntBASIC13.2□□□□□ -0.3
Smarcc1P97496 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Smarcc1P97496 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 AC149294.3-201ENSMUST00000226888 732 ntBASIC13.2□□□□□ -0.3
Smarcc1P97496 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smarcc1P97496 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.2□□□□□ -0.3
Smarcc1P97496 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcc1P97496 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm8848-201ENSMUST00000197270 1343 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm14370-201ENSMUST00000122460 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm15273-201ENSMUST00000142302 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm7023-201ENSMUST00000147295 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm14357-201ENSMUST00000178352 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm14361-201ENSMUST00000178547 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm14348-201ENSMUST00000179183 868 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm7672-201ENSMUST00000180915 872 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcc1P97496 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 AC123533.3-201ENSMUST00000228056 454 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm17541-201ENSMUST00000080062 525 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.19□□□□□ -0.3
Smarcc1P97496 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcc1P97496 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Smarcc1P97496 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcc1P97496 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC13.18□□□□□ -0.3
Smarcc1P97496 Gm22763-201ENSMUST00000158374 107 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms