Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm12489-201ENSMUST00000119364 148 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Gm14234-201ENSMUST00000119539 845 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Gm24809-201ENSMUST00000175318 271 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Gm31274-201ENSMUST00000197356 229 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Gm3619-201ENSMUST00000219947 775 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 AC164883.7-201ENSMUST00000228534 851 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.25□□□□□ -0.93
Lsm6P62313 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.25□□□□□ -0.93
Lsm6P62313 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.25□□□□□ -0.93
Lsm6P62313 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.25□□□□□ -0.93
Lsm6P62313 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Lsm6P62313 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lsm6P62313 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm22582-201ENSMUST00000102283 94 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Lsm6P62313 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm8216-201ENSMUST00000117232 601 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Gm14665-201ENSMUST00000122294 557 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.24□□□□□ -0.93
Lsm6P62313 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Gm37020-201ENSMUST00000195303 992 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.24□□□□□ -0.93
Lsm6P62313 Gm26670-202ENSMUST00000226862 340 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Atf7-201ENSMUST00000096143 390 ntBASIC9.24□□□□□ -0.93
Lsm6P62313 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.24□□□□□ -0.93
Lsm6P62313 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lsm6P62313 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lsm6P62313 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.23□□□□□ -0.93
Lsm6P62313 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Lsm6P62313 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Lsm6P62313 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm6P62313 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.23□□□□□ -0.93
Lsm6P62313 Gm12208-201ENSMUST00000122004 163 ntBASIC9.23□□□□□ -0.93
Lsm6P62313 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lsm6P62313 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.23□□□□□ -0.93
Lsm6P62313 Gm24248-201ENSMUST00000157321 322 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms