Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cd9P40240 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cd9P40240 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.38□□□□□ -0.75
Cd9P40240 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC10.37□□□□□ -0.75
Cd9P40240 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.37□□□□□ -0.75
Cd9P40240 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
Cd9P40240 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Gm3712-201ENSMUST00000118523 2071 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cd9P40240 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Gm6500-201ENSMUST00000119412 451 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm11736-201ENSMUST00000121468 505 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm13857-201ENSMUST00000139645 173 ntBASIC10.37□□□□□ -0.75
Cd9P40240 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Gm8723-201ENSMUST00000166076 820 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm8701-201ENSMUST00000169259 874 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm8492-201ENSMUST00000182375 987 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm28324-201ENSMUST00000187913 264 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm29157-201ENSMUST00000188753 612 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.37□□□□□ -0.75
Cd9P40240 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.37□□□□□ -0.75
Cd9P40240 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Cd9P40240 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.37□□□□□ -0.75
Cd9P40240 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.37□□□□□ -0.75
Cd9P40240 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.37□□□□□ -0.75
Cd9P40240 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cd9P40240 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cd9P40240 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC10.36□□□□□ -0.75
Cd9P40240 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Gm6881-201ENSMUST00000121811 833 ntBASIC10.36□□□□□ -0.75
Cd9P40240 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.36□□□□□ -0.75
Cd9P40240 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cd9P40240 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Gm37232-201ENSMUST00000194887 367 ntBASIC10.36□□□□□ -0.75
Cd9P40240 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.36□□□□□ -0.75
Cd9P40240 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.36□□□□□ -0.75
Cd9P40240 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cd9P40240 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC10.36□□□□□ -0.75
Cd9P40240 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd9P40240 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd9P40240 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms