Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Vcam1P29533 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.07□□□□□ -0.48
Vcam1P29533 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vcam1P29533 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vcam1P29533 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm24066-201ENSMUST00000104515 131 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm3687-201ENSMUST00000161710 460 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm17815-201ENSMUST00000198305 895 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm45310-201ENSMUST00000210436 275 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 AC102327.1-201ENSMUST00000226389 742 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm7190-201ENSMUST00000118669 1452 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Gm45728-201ENSMUST00000211475 2979 ntBASIC12.06□□□□□ -0.48
Vcam1P29533 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vcam1P29533 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Vcam1P29533 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Vcam1P29533 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vcam1P29533 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm17797-201ENSMUST00000182175 997 ntBASIC12.05□□□□□ -0.48
Vcam1P29533 Mir6396-201ENSMUST00000183603 111 ntBASIC12.05□□□□□ -0.48
Vcam1P29533 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm37036-201ENSMUST00000192836 2506 ntBASIC12.05□□□□□ -0.48
Vcam1P29533 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vcam1P29533 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vcam1P29533 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vcam1P29533 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vcam1P29533 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms