Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 AC167565.1-201ENSMUST00000226980 1833 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm44153-201ENSMUST00000204162 1580 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm43589-201ENSMUST00000199400 1523 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Snord17-201ENSMUST00000104526 238 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm6620-201ENSMUST00000120113 715 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm12791-201ENSMUST00000120788 655 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm11675-201ENSMUST00000121873 832 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Rn7s6-201ENSMUST00000175005 291 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm6771-201ENSMUST00000182716 1001 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Olfr1055-202ENSMUST00000188023 939 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm9369-201ENSMUST00000196009 733 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm19166-201ENSMUST00000196041 1063 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm43460-201ENSMUST00000202491 1057 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC8.61□□□□□ -1.03
Hoxd3P09027 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 AC134248.1-201ENSMUST00000216113 1176 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 AC156952.1-201ENSMUST00000220361 793 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm18968-201ENSMUST00000221319 862 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC8.61□□□□□ -1.03
Hoxd3P09027 CT030653.1-201ENSMUST00000224382 1279 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm16380-201ENSMUST00000077997 478 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm3550-201ENSMUST00000105038 1656 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm7278-201ENSMUST00000119836 1401 ntBASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hoxd3P09027 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Hoxd3P09027 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms